Tehran University of Medical Sciences

Science Communicator Platform

Faculty Members have conducted research related to the Lightweight 3D U-Net for Robust Liver Segmentation in Multi-Institutional Ct Datasets
Parastoo Farnia
Parastoo Farnia

Assistant Professor of Biomedical Engineering

Department Biomedical Engineering & Medical Physics

School of Medicine

Tehran University of Medical Sciences

Related Documents
1. Automated Multiclass Segmentation of Liver Vessel Structures in Ct Images Using Deep Learning Approaches: A Liver Surgery Pre-Planning Tool, Physical and Engineering Sciences in Medicine (2025)
2. Accurate Automatic Glioma Segmentation in Brain Mri Images Based on Capsnet, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society# EMBS (2021)
All Documents
1. Minimal Invasive Navigation–Assisted Removal of Penetrating Metallic Foreign Bodies in the Craniomaxillofacial Region: A Case Report, Case Reports in Dentistry (2026)
2. Platif: A Pioneering Dataset for Orthopedic Insights in Ai-Powered Diagnosis of Tibial Plateau Fractures, Scientific Data (2026)
3. 2D Residual U-Net for Accurate Lumbar Vertebrae Segmentation in Mri-Based Low Back Pain Diagnosis Using the Spider Dataset, 32nd National and 10th International Iranian Conference on Biomedical Engineering, ICBME 2025 (2025)
4. A Review on Learning-Based Algorithms for Tractography and Human Brain White Matter Tracts Recognition, Neuroradiology (2025)
5. Accurate Brain Vessel Segmentation in T1-Weighted Mri Based on Unetr: Improving Neurosurgical Planning, 32nd National and 10th International Iranian Conference on Biomedical Engineering, ICBME 2025 (2025)
6. Automated Multiclass Segmentation of Liver Vessel Structures in Ct Images Using Deep Learning Approaches: A Liver Surgery Pre-Planning Tool, Physical and Engineering Sciences in Medicine (2025)
7. Modeling the Impact of Intercellular Signaling on Dose Metrics and Therapeutic Outcomes in Spatially Fractionated Radiation Therapy (Sfrt) for Lung Cancer, Scientific Reports (2025)
8. Swin-Unet on Knee X-Ray Images, 32nd National and 10th International Iranian Conference on Biomedical Engineering, ICBME 2025 (2025)
9. U-Convnext: A Robust Approach to Glioma Segmentation in Intraoperative Ultrasound, Journal of Imaging Informatics in Medicine (2025)
10. D2bgan: Dual Discriminator Bayesian Generative Adversarial Network for Deformable Mr–Ultrasound Registration Applied to Brain Shift Compensation, Diagnostics (2024)
11. An Efficient Capsule-Based Network for 2D Left Ventricle Segmentation in Echocardiography Images, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society# EMBS (2023)
12. A Hybrid Capsule Network for Automatic 3D Mandible Segmentation Applied in Virtual Surgical Planning, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society# EMBS (2022)
13. Fundamentals of Navigation Surgery, Navigation in Oral and Maxillofacial Surgery: Applications# Advances# and Limitations (2022)
14. Photoacoustic-Mr Image Registration Based on a Co-Sparse Analysis Model to Compensate for Brain Shift, Sensors (2022)
15. Accurate Automatic Glioma Segmentation in Brain Mri Images Based on Capsnet, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society# EMBS (2021)
16. Bronchoscope Motion Tracking Using Centerline-Guided Gaussian Mixture Model in Navigated Bronchoscopy, Physics in Medicine and Biology (2021)
17. Image-Guided Surgery and Its Future With the Artificial Intelligence, Frontiers in Biomedical Technologies (2021)
18. Automatic Detection of Symmetry Plane for Computer-Aided Surgical Simulation in Craniomaxillofacial Surgery, Physical and Engineering Sciences in Medicine (2020)
19. Compensation of Dynamic Electromagnetic Field Distortion Using Simultaneous Localization and Mapping Method With Application in Endobronchial Ultrasound-Transbronchial Needle Aspiration (Ebus-Tbna) Guidance, International Journal of Medical Robotics and Computer Assisted Surgery (2020)
20. Dictionary Learning Technique Enhances Signal in Led-Based Photoacoustic Imaging, Biomedical Optics Express (2020)
21. Evaluation of Multi-Wavelengths Led-Based Photoacoustic Imaging for Maximum Safe Resection of Glioma: A Proof of Concept Study, International Journal of Computer Assisted Radiology and Surgery (2020)
22. High-Quality Photoacoustic Image Reconstruction Based on Deep Convolutional Neural Network: Towards Intra-Operative Photoacoustic Imaging, Biomedical Physics and Engineering Express (2020)
23. Light-Emitting Diode Based Photoacoustic Imaging System, Frontiers in Biomedical Technologies (2020)
24. Photoacoustic Image Improvement Based on a Combination of Sparse Coding and Filtering, Journal of Biomedical Optics (2020)
25. Application of Multi-Wavelength Technique for Photoacoustic Imaging to Delineate Tumor Margins During Maximum-Safe Resection of Glioma: A Preliminary Simulation Study, Journal of Clinical Neuroscience (2019)
26. Detection of Early Stages Dental Caries Using Photoacoustic Signals: The Simulation Study, Frontiers in Biomedical Technologies (2019)
27. Co-Sparse Analysis Model Based Image Registration to Compensate Brain Shift by Using Intra-Operative Ultrasound Imaging, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society# EMBS (2018)
28. Segmentation of Gbm in Mri Images Using an Efficient Speed Function Based on Level Set Method, Proceedings - 2017 10th International Congress on Image and Signal Processing# BioMedical Engineering and Informatics# CISP-BMEI 2017 (2017)
29. A Robust Keypoint Extraction and Matching Algorithm Based on Wavelet Transform and Information Theory for Point-Based Registration in Endoscopic Sinus Cavity Data, Signal# Image and Video Processing (2016)
30. Curvelet Based Residual Complexity Objective Function for Non-Rigid Registration of Pre-Operative Mri With Intra-Operative Ultrasound Images, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society# EMBS (2016)
31. Brain-Shift Compensation by Non-Rigid Registration of Intra-Operative Ultrasound Images With Preoperative Mr Images Based on Residual Complexity, International Journal of Computer Assisted Radiology and Surgery (2015)